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Vibrio scophthalmi

Species in genus Vibrio, family Vibrionaceae (order Vibrionales). (from NCBI Taxonomy lineage)

Names over time

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Cross-database view

NCBI

NCBI Taxonomy taxdump · 2026-10-23
taxid: 45658
Bacteria > Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio scophthalmi

GTDB

id: s__Vibrio scophthalmi · GTDB R232

Database's species id. At its weakest, linked by GTDB's own NCBI species id rather than the genome's raw one.

d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio;s__Vibrio scophthalmi

SILVA

Vibrio scophthalmi
id: U46579 · SILVA 138.2

Walked up to species. At its weakest, linked by walking up 1 level from a strain or subspecies record to the species.

Bacteria;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Vibrionaceae;Vibrio;

Greengenes2

Vibrio_A_678206 aestuarianus
id: Vibrio_A_678206 aestuarianus · Greengenes2 2024.09

Genome accession. Linked via GTDB R220 genome accessions — the same physical genomes, not a name match.

d__Bacteria; p__Pseudomonadota; c__Gammaproteobacteria; o__Enterobacterales_737866; f__Vibrionaceae; g__Vibrio_A_678206; s__Vibrio_A_678206 aestuarianus

Renamed: Greengenes2 gives this taxon a different name in 2022.10, 2024.09.

eHOMD

Release 4.2

No record in eHOMD 4.2.

Each panel shows one release. Switch a release to see how that database's answer changes — the taxon is held fixed by NCBI taxid, so every panel describes the same organism. Each panel also says how it was linked; how the databases are joined explains the routes.

Lineage by rank

RankNCBIGTDB R232SILVA 138.2Greengenes2 2024.09
domainBacteriaBacteriaBacteriaBacteria
phylumPseudomonadotaPseudomonadotaPseudomonadotaPseudomonadota
classGammaproteobacteriaGammaproteobacteriaGammaproteobacteriaGammaproteobacteria
orderVibrionalesfirst rank that differs from NCBI: Enterobacteralesfirst rank that differs from NCBI: Enterobacteralesfirst rank that differs from NCBI: Enterobacterales_737866
familyVibrionaceaeVibrionaceaeVibrionaceaeVibrionaceae
genusVibrioVibrioVibrioVibrio_A_678206
speciesVibrio scophthalmiVibrio scophthalmi—Vibrio_A_678206 aestuarianus

Each column is the release its box shows. marks the first rank at which a database's name differs from NCBI's, by exact text; a suffix such as _A counts. SILVA's path and eHOMD's columns end at genus, so their species row is blank; the box above names the species. Levels a source labels outside these seven ranks are in the API's ranks and not drawn here.

Names in NCBI

from NCBI Taxonomy taxdump · 2026-10-23
  • Vibrio scophthalmicurrent

Other names in these databases

GTDB R232

  • Vibrio scophthalmi
  • Vibrio cholerae_D

SILVA 138.2

  • Vibrio scophthalmi
  • Vibrio scophthalmi LMG 19158

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Taxon: Vibrio scophthalmi (taxid 45658)

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Vibrio scophthalmi — taxon-sync