NCBI
NCBI Taxonomy taxdump · 2026-10-23taxid: 29471
Bacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Pectobacterium > Pectobacterium atrosepticum
Pectobacterium atrosepticum
Species in genus Pectobacterium, family Pectobacteriaceae (order Enterobacterales). (from NCBI Taxonomy lineage)
Names over time
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Cross-database view
GTDB
Pectobacterium atrosepticum
id: s__Pectobacterium atrosepticum · GTDB R232
Database's species id. At its weakest, linked by GTDB's own NCBI species id rather than the genome's raw one.
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pectobacterium;s__Pectobacterium atrosepticum
SILVA
Pectobacterium atrosepticum
id: JN600332 · SILVA 138.2
Walked up to species. At its weakest, linked by walking up 1 level from a strain or subspecies record to the species.
Bacteria;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Pectobacteriaceae;Pectobacterium;
Greengenes2
Pectobacterium_A_725313 aroidearum
id: Pectobacterium_A_725313 aroidearum · Greengenes2 2024.09
Genome accession. Linked via GTDB R220 genome accessions — the same physical genomes, not a name match.
d__Bacteria; p__Pseudomonadota; c__Gammaproteobacteria; o__Enterobacterales_737866; f__Enterobacteriaceae_A_726016; g__Pectobacterium_A_725313; s__Pectobacterium_A_725313 aroidearum
Only 4 genomes — below the threshold for detecting a split, so “current” here means unverified, not confirmed.
Renamed: Greengenes2 gives this taxon a different name in 2022.10, 2024.09.
eHOMD
Release 4.2No record in eHOMD 4.2.
Each panel shows one release. Switch a release to see how that database's answer changes — the taxon is held fixed by NCBI taxid, so every panel describes the same organism. Each panel also says how it was linked; how the databases are joined explains the routes.
Lineage by rank
| Rank | NCBI | GTDB R232 | SILVA 138.2 | Greengenes2 2024.09 |
|---|---|---|---|---|
| domain | Bacteria | Bacteria | Bacteria | Bacteria |
| phylum | Pseudomonadota | Pseudomonadota | Pseudomonadota | Pseudomonadota |
| class | Gammaproteobacteria | Gammaproteobacteria | Gammaproteobacteria | Gammaproteobacteria |
| order | Enterobacterales | Enterobacterales | Enterobacterales | first rank that differs from NCBI: Enterobacterales_737866 |
| family | Pectobacteriaceae | first rank that differs from NCBI: Enterobacteriaceae | Pectobacteriaceae | Enterobacteriaceae_A_726016 |
| genus | Pectobacterium | Pectobacterium | Pectobacterium | Pectobacterium_A_725313 |
| species | Pectobacterium atrosepticum | Pectobacterium atrosepticum | — | Pectobacterium_A_725313 aroidearum |
Each column is the release its box shows. marks the first rank at which a database's name differs from NCBI's, by exact text; a suffix such as _A counts. SILVA's path and eHOMD's columns end at genus, so their species row is blank; the box above names the species. Levels a source labels outside these seven ranks are in the API's ranks and not drawn here.
Names in NCBI
from NCBI Taxonomy taxdump · 2026-10-23- Pectobacterium atrosepticumcurrent
- Bacillus atrosepticussynonym
- Bacterium atrosepticumsynonym
- Bacterium cartovorum var. atrosepticumsynonym
- Erwinia atrosepticasynonym
- Erwinia caratovora subsp. atrosepticasynonym
- Erwinia carotovora atrosepticasynonym
- Erwinia carotovora subsp. atrosepticasynonym
- Erwinia carotovora var. atrosepticasynonym
- Pectobacterium carotovorum subsp. atrosepticumsynonym
- Pectobacterium carotovorum var. atrosepticumsynonym
Other names in these databases
GTDB R232
- Pectobacterium atrosepticum
- Pectobacterium versatile
SILVA 138.2
- Pectobacterium atrosepticum
- Pectobacterium atrosepticum SCRI1043
- Pectobacterium atrosepticum CFBP 6276
- Pectobacterium atrosepticum ICMP 1526