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[Clostridium] symbiosum

Species in genus Otoolea, family Lachnospiraceae (order Lachnospirales). (from NCBI Taxonomy lineage)

Names over time

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Cross-database view

NCBI

NCBI Taxonomy taxdump · 2026-10-23
Bacteria > Bacillota > Clostridia > Lachnospirales > Lachnospiraceae > Otoolea > [Clostridium] symbiosum

GTDB

id: s__Otoolea symbiosa · GTDB R232

Database's species id. At its weakest, linked by GTDB's own NCBI species id rather than the genome's raw one.

d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Otoolea;s__Otoolea symbiosa

Renamed: GTDB gives this taxon a different name in R207, R214, R220, R226, R232.

SILVA

[Clostridium] symbiosum
id: KU321267 · SILVA 138.2

Walked up to species. At its weakest, linked by walking up 1 level from a strain or subspecies record to the species.

Bacteria;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;

Greengenes2

Otoolea symbiosa
id: Otoolea symbiosa · Greengenes2 2024.09

Genome accession. Linked via GTDB R220 genome accessions — the same physical genomes, not a name match.

d__Bacteria; p__Bacillota_A_368345; c__Clostridia_258483; o__Lachnospirales; f__Lachnospiraceae; g__Otoolea_134252; s__Otoolea symbiosa
Only 4 genomes — below the threshold for detecting a split, so “current” here means unverified, not confirmed.

Renamed: Greengenes2 gives this taxon a different name in 2022.10, 2024.09.

eHOMD

Release 4.2

No record in eHOMD 4.2.

Each panel shows one release. Switch a release to see how that database's answer changes — the taxon is held fixed by NCBI taxid, so every panel describes the same organism. Each panel also says how it was linked; how the databases are joined explains the routes.

Lineage by rank

RankNCBIGTDB R232SILVA 138.2Greengenes2 2024.09
domainBacteriaBacteriaBacteriaBacteria
phylumBacillotaBacillotaBacillotafirst rank that differs from NCBI: Bacillota_A_368345
classClostridiaClostridiaClostridiaClostridia_258483
orderLachnospiralesLachnospiralesLachnospiralesLachnospirales
familyLachnospiraceaeLachnospiraceaeLachnospiraceaeLachnospiraceae
genusOtooleaOtooleafirst rank that differs from NCBI: LachnoclostridiumOtoolea_134252
species[Clostridium] symbiosumfirst rank that differs from NCBI: Otoolea symbiosa—Otoolea symbiosa

Each column is the release its box shows. marks the first rank at which a database's name differs from NCBI's, by exact text; a suffix such as _A counts. SILVA's path and eHOMD's columns end at genus, so their species row is blank; the box above names the species. Levels a source labels outside these seven ranks are in the API's ranks and not drawn here.

Names in NCBI

from NCBI Taxonomy taxdump · 2026-10-23
  • [Clostridium] symbiosumcurrent
  • Bacteroides symbiosussynonym
  • Clostridium symbiosumsynonym

Other names in these databases

GTDB R232

  • Otoolea symbiosa
  • Otoolea symbiosa_A
  • 1XD8-76 sp021769625

SILVA 138.2

  • [Clostridium] symbiosum
  • [Clostridium] symbiosum ATCC 14940
  • [Clostridium] symbiosum WAL-14163
  • [Clostridium] symbiosum WAL-14673

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Taxon: [Clostridium] symbiosum (taxid 1512)

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[Clostridium] symbiosum — taxon-sync