[Clostridium] symbiosum
Species in genus Otoolea, family Lachnospiraceae (order Lachnospirales). (from NCBI Taxonomy lineage)
Names over time
Cross-database view
GTDB
Database's species id. At its weakest, linked by GTDB's own NCBI species id rather than the genome's raw one.
Renamed: GTDB gives this taxon a different name in R207, R214, R220, R226, R232.
SILVA
Walked up to species. At its weakest, linked by walking up 1 level from a strain or subspecies record to the species.
Greengenes2
Genome accession. Linked via GTDB R220 genome accessions — the same physical genomes, not a name match.
Renamed: Greengenes2 gives this taxon a different name in 2022.10, 2024.09.
eHOMD
Release 4.2No record in eHOMD 4.2.
Each panel shows one release. Switch a release to see how that database's answer changes — the taxon is held fixed by NCBI taxid, so every panel describes the same organism. Each panel also says how it was linked; how the databases are joined explains the routes.
Lineage by rank
| Rank | NCBI | GTDB R232 | SILVA 138.2 | Greengenes2 2024.09 |
|---|---|---|---|---|
| domain | Bacteria | Bacteria | Bacteria | Bacteria |
| phylum | Bacillota | Bacillota | Bacillota | first rank that differs from NCBI: Bacillota_A_368345 |
| class | Clostridia | Clostridia | Clostridia | Clostridia_258483 |
| order | Lachnospirales | Lachnospirales | Lachnospirales | Lachnospirales |
| family | Lachnospiraceae | Lachnospiraceae | Lachnospiraceae | Lachnospiraceae |
| genus | Otoolea | Otoolea | first rank that differs from NCBI: Lachnoclostridium | Otoolea_134252 |
| species | [Clostridium] symbiosum | first rank that differs from NCBI: Otoolea symbiosa | — | Otoolea symbiosa |
Each column is the release its box shows. marks the first rank at which a database's name differs from NCBI's, by exact text; a suffix such as _A counts. SILVA's path and eHOMD's columns end at genus, so their species row is blank; the box above names the species. Levels a source labels outside these seven ranks are in the API's ranks and not drawn here.
Names in NCBI
from NCBI Taxonomy taxdump · 2026-10-23- [Clostridium] symbiosumcurrent
- Bacteroides symbiosussynonym
- Clostridium symbiosumsynonym
Other names in these databases
GTDB R232
- Otoolea symbiosa
- Otoolea symbiosa_A
- 1XD8-76 sp021769625
SILVA 138.2
- [Clostridium] symbiosum
- [Clostridium] symbiosum ATCC 14940
- [Clostridium] symbiosum WAL-14163
- [Clostridium] symbiosum WAL-14673