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Rhodobacter capsulatus

Species in genus Rhodobacter. (from NCBI Taxonomy lineage)

Warning: This taxon splits 1→many across databases. Read the panels carefully.

Names over time

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Cross-database view

NCBI

NCBI Taxonomy taxdump · 2026-10-23
Bacteria > Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Rhodobacter > Rhodobacter capsulatus

GTDB

id: s__Rhodobacter capsulatus_B / s__Rhodobacter capsulatus · GTDB R232

Database's species id. At its weakest, linked by GTDB's own NCBI species id rather than the genome's raw one.

d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter;s__Rhodobacter capsulatus_B
Warning: GTDB R232 places this taxon's 25 genomes in 2 species.

SILVA

Rhodobacter capsulatus
id: KJ776415 · SILVA 138.2

Walked up to species. At its weakest, linked by walking up 1 level from a strain or subspecies record to the species.

Bacteria;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Paracoccaceae;Paenirhodobacter;

Greengenes2

Rhodobacter_B_493196 capsulatus_B
id: Rhodobacter_B_493196 capsulatus_B · Greengenes2 2024.09

Genome accession. Linked via GTDB R220 genome accessions — the same physical genomes, not a name match.

d__Bacteria; p__Pseudomonadota; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Rhodobacter_B_493196; s__Rhodobacter_B_493196 capsulatus_B
Only 3 genomes — below the threshold for detecting a split, so “current” here means unverified, not confirmed.

Renamed: Greengenes2 gives this taxon a different name in 2022.10, 2024.09.

eHOMD

Release 4.2
Rhodobacter capsulatus
id: HMT-857 · eHOMD 4.2

Exact taxid. Linked by NCBI taxid — eHOMD records the same id NCBI does.

Bacteria;Pseudomonadota;Alphaproteobacteria;Rhodobacterales;Paracoccaceae;Rhodobacter
Only 1 genome — below the threshold for detecting a split, so “current” here means unverified, not confirmed.

Each panel shows one release. Switch a release to see how that database's answer changes — the taxon is held fixed by NCBI taxid, so every panel describes the same organism. Each panel also says how it was linked; how the databases are joined explains the routes.

Lineage by rank

RankNCBIGTDB R232SILVA 138.2Greengenes2 2024.09eHOMD 4.2
domainBacteriaBacteriaBacteriaBacteriaBacteria
phylumPseudomonadotaPseudomonadotaPseudomonadotaPseudomonadotaPseudomonadota
classAlphaproteobacteriaAlphaproteobacteriaAlphaproteobacteriaAlphaproteobacteriaAlphaproteobacteria
orderRhodobacteralesRhodobacteralesRhodobacteralesRhodobacteralesRhodobacterales
family—RhodobacteraceaeParacoccaceaeRhodobacteraceaeParacoccaceae
genusRhodobacterRhodobacterfirst rank that differs from NCBI: Paenirhodobacterfirst rank that differs from NCBI: Rhodobacter_B_493196Rhodobacter
speciesRhodobacter capsulatusfirst rank that differs from NCBI: Rhodobacter capsulatus_B—Rhodobacter_B_493196 capsulatus_B—

Each column is the release its box shows. marks the first rank at which a database's name differs from NCBI's, by exact text; a suffix such as _A counts. SILVA's path and eHOMD's columns end at genus, so their species row is blank; the box above names the species. Levels a source labels outside these seven ranks are in the API's ranks and not drawn here.

Names in NCBI

from NCBI Taxonomy taxdump · 2026-10-23
  • Rhodobacter capsulatuscurrent
  • Rhodopseudomonas capsulata corrig. (Molisch 1907) van Niel 1944 (Approved Lists 1980)synonym
  • Rhodopseudomonas capsulatussynonym

Other names in these databases

GTDB R232

  • Rhodobacter capsulatus_B
  • Rhodobacter capsulatus
  • Rhodobacter capsulatus_C
  • Rhodobacter capsulatus_D
  • Rhodobacter capsulatus_E

SILVA 138.2

  • Rhodobacter capsulatus
  • Rhodobacter capsulatus SB 1003
  • Rhodobacter capsulatus B6
  • Rhodobacter capsulatus DE442
  • Rhodobacter capsulatus R121
  • Rhodobacter capsulatus Y262
  • Rhodobacter capsulatus YW1
  • Rhodobacter capsulatus YW2

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Taxon: Rhodobacter capsulatus (taxid 1061)

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Rhodobacter capsulatus — taxon-sync